If you specify -X f or more likely -X s, that will cause pg_basebackup to include the WAL files that were written after you started the operation. Since you're setting up a replica, use the -X s option as that's for streaming.
I ran pg_basebackup with -X s and it finished in the middle of the night last night. I would now like to make the switch, but what's the best way to copy over the records that have been inserted since the backup stopped?