Re: UNIQUE constraint on character sequences

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Re: UNIQUE constraint on character sequences

От:
David Johnston <polobo@yahoo.com>
Дата:
Could you index the reverse of the string so the unique part appears first?

On May 14, 2011, at 11:20, InterRob  wrote:

> Dear list,
> 
> I would be pleased if you could share some thoughts with me on the following: say I wish to maintain a table with all distinct character sequences (variable length) showing series with strong similarities. Example:
> "abbbabacccdef"
> "abbbabaccdcdf"
> "abbbabaccdcgf"
> ...
> "qwtrhdffdd"
> ...
> "qwtrhdffdds"
> ...
> "qwtrhdffddsspp"
> "qwtrhdffddsspf"
> "qwtrhdffddssph"
> "qwtrhdffddsspL"
> etc.
> 
> Think of them as ordered values (array-like), as a set having many values in common, in the same "elements" (that is: positions; in my application, each position has some particular meaning -- the sequence represents a set of particular settings)
> 
> CREATE TABLE textseqs(txtseq TEXT)
> 
> What would be an efficient approach in enforcing a UNIQUE constraint?
> 
> I was thinking of using hashbuckets in a b-tree:
> CREATE UNIQUE INDEX ON textseqs USING BTREE( hashtext(txtseq), txtseq )
> 
> This index would "cache" hashes for each row. Upon inserting of a new row, traversing the index involves the comparison of two single integers for each node in the b-tree, until the actual hash value (if it exists) was reached. Then, only within that bucket (the hashes won't be unique), the more expensive string comparing is required; involving a sequencial comparison of (potentially maaaany) characters. Yet, within that bucket, the character series may be expected to show stronger differences than a plain sorted list of all values in the table would have, indexed by a b-tree index. Wouldn't traversing such a plain (non-composite, single column, on: "txtseq") b-tree index involve a sequencial comparison of (potentially many) characters *at EACH NODE* of the tree ? Or am I mistaken that each node is filled with actual values from the txtseq column?
> 
> Thank you for your input!
> 
> Cheers,
> Rob

UNIQUE constraint on character sequences

От:
InterRob <rob.marjot@gmail.com>
Дата:
Dear list,

I would be pleased if you could share some thoughts with me on the following: say I wish to maintain a table with all distinct character sequences (variable length) showing series with strong similarities. Example:
"abbbabacccdef"
"abbbabaccdcdf"
"abbbabaccdcgf"
...
"qwtrhdffdd"
...
"qwtrhdffdds"
...
"qwtrhdffddsspp"
"qwtrhdffddsspf"
"qwtrhdffddssph"
"qwtrhdffddsspL"
etc.

Think of them as ordered values (array-like), as a set having many values in common, in the same "elements" (that is: positions; in my application, each position has some particular meaning -- the sequence represents a set of particular settings)

CREATE TABLE textseqs(txtseq TEXT)

What would be an efficient approach in enforcing a UNIQUE constraint?

I was thinking of using hashbuckets in a b-tree:
CREATE UNIQUE INDEX ON textseqs USING BTREE( hashtext(txtseq), txtseq )

This index would "cache" hashes for each row. Upon inserting of a new row, traversing the index involves the comparison of two single integers for each node in the b-tree, until the actual hash value (if it exists) was reached. Then, only within that bucket (the hashes won't be unique), the more expensive string comparing is required; involving a sequencial comparison of (potentially maaaany) characters. Yet, within that bucket, the character series may be expected to show stronger differences than a plain sorted list of all values in the table would have, indexed by a b-tree index. Wouldn't traversing such a plain (non-composite, single column, on: "txtseq") b-tree index involve a sequencial comparison of (potentially many) characters *at EACH NODE* of the tree ? Or am I mistaken that each node is filled with actual values from the txtseq column?

Thank you for your input!

Cheers,
Rob
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